Department Seminar

Molecular Engineering of Optical Tools for Enhanced Control over the Brain

Speaker Details:

Andre Berndt
Postdoctoral Fellow
Stanford University

Lecture Details:

January 7, 2016
12:30-1:20 p.m.
Foege N130A, Wallace H. Coulter Seminar Room

Abstract:

Light activated channels and pumps, are well established, powerful tools for revealing the function of neuronal circuits in the new field of optogenetics. Proteins such as channelrhodopsin and halorhodopsin had a groundbreaking impact on neuroscience research because they allow for precise control of specific neuronal populations even in freely moving animals. As a biophysicist I understand that the application range of these tools is critically connected to their inherent biophysical properties. In my talk I will describe how molecular engineering created proteins with novel features which allowed us to broaden the application range of optogenetics. For instance, the speed of channelrhodopsin activation and deactivation restricts the maximum frequency for action potential generation in neurons. Accelerating channel kinetics by protein engineering resulted in the variant ChETA which enabled light induced spike generation with up to 200 Hz. In another example, I will describe the development of the chloride conducting channelrhodopsin iC++ by converting the selectivity of its ion conducting pore which ultimately allows for efficient, light-gated inhibition of neurons. The foundation for these protein designs is a fundamental understanding of their molecular mechanisms. The same principles can be applied to create a variety of new tools which will help to further elucidate the functional architecture of the brain.

Speaker Bio:

Andre Berndt is a postdoctoral fellow in Karl Deisseroth’s lab at Stanford University. He received his Ph.D. in biophysics from the Humboldt University in Berlin, Germany, after elucidating the molecular mechanism of the light-gated cation channel Channelrhodopsin-2. Based on this essential work, he extended the optogenetic toolbox by engineering various tools for controlling neuronal circuits by light. He continued his work as a postdoc at Stanford where he further identified the structural determinants of channelrhodopsin ion selectivity, leading to the design of a completely new channelrhodospsin which conducts chloride ions. By combining biophysics and bioengineering with neuroscience, he aims to develop the most efficient tools for interrogating neuronal circuits with increased specificity. Andre enjoys spending his spare time biking and climbing.